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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62087150
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRRGRRARRA TRCLTHGFQA LSGFIFLWNF CFTDRTMAAR VLIIGSGGRE HTLAWKLAQS  60
   61 HHVKQVLVAP GNAGTACSEK ISNTAISISD HTALAQFCKE KKIEFVVVGP EAPLAAGIVG 120
  121 NLRSAGVQCF GPTAEAAQLE SSKRFAKEFM DRHGIPTAQW KAFTKPEEAC SFILSADFPA 180
  181 LVVKASGLAA GKGVIVAKSK EEACKAVQEI MQEKAFGAAG ETIVIEELLD GEEVSCLCFT 240
  241 DGKTVAPMPP AQDHKRLLEG DGGPNTGGMG AYCPAPQVSN DLLLKIKDTV LQRTVDGMQQ 300
  301 EGTPYTGILY AGIMLTKNGP KVLEFNCRFG DPECQVILPL LKSDLYEVIQ STLDGLLCTS 360
  361 LPVWLENHTA LTVVMASKGY PGDYTKGVEI TGFPEAQALG LEVFHAGTAL KNGKVVTHGG 420
  421 RVLAVTAIRE NLISALEEAK KGLAAIKFEG AIYRKDIGFR AIAFLQQPRS LTYKESGVDI 480
  481 AAGNMLVKKI QPLAKATSRS GCKVDLGGFA GLFDLKAAGF KDPLLASGTD GVGTKLKIAQ 540
  541 LCNKHDTIGQ DLVAMCVNDI LAQGAEPLFF LDYFSCGKLD LSVTEAVVAG IAKACGKAGC 600
  601 ALLGGETAEM PDMYPPGEYD LAGFAVGAME RDQKLPHLER ITEGDVVVGI ASSGLHSNGF 660
  661 SLVRKIVAKS SLQYSSPAPD GCGDQTLGDL LLTPTRIYSH SLLPVLRSGH VKAFAHITGG 720
  721 GLLENIPRVL PEKLGVDLDA QTWRIPRVFS WLQQEGHLSE EEMARTFNCG VGAVLVVSKE 780
  781 QTEQILRDIQ QHKEEAWVIG SVVARAEGSP RVKVKNLIES MQINGSVLKN GSLTNHFSFE 840
  841 KKKARVAVLI SGTGSNLQAL IDSTREPNSS AQIDIVISNK AAVAGLDKAE RAGIPTRVIN 900
  901 HKLYKNRVEF DSAIDLVLEE FSIDIVCLAG FMRILSGPFV QKWNGKMLNI HPSLLPSFKG 960
  961 SNAHEQALET GVTVTGCTVH FVAEDVDAGQ IILQEAVPVK RGDTVATLSE RVKLAEHKIF1020
 1021 PAALQLVASG TVQLGENGKI CWVKEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle