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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62087740
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPAFACAAAF LLHLFSSASA GAMAKPLTDS EKRKQISVRG LAGLGDVAEV RKSFNRHLHF  60
   61 TLVKDRNVAT PRDYFFALAH TVRDHLVGRW IRTQQHYYER DPKRIYYLSL EFYMGRTLQN 120
  121 TMVNLGLQNA CDEAIYQLGL DLEELEEIEE DAGLGNGGLG RLAACFLDSM ATLGLAAYGY 180
  181 GIRYEFGIFN QKIVNGWQVE EADDWLRYGN PWEKARPEYM LPVHFYGRVE HTPDGVKWLD 240
  241 TQVVLAMPYD TPVPGYKNNT VNTMRLWSAK APNDFKLQDF NVGDYIEAVL DRNLAENISR 300
  301 VLYPNDNFFE GKELRLKQEY FVVASTLQDI IRRFKSSKFG CRDPVRTCFE TFPDKVAIQL 360
  361 NDTHPALSIP ELMRILVDVE KVDWDKAWEI TKKTCAYTNH TVLPEALERW PVSMFEKLLP 420
  421 RHLEIIYAIN QRHLDHVAAL FPGDVDRLRR MSVIEEGDCK RINMAHLCVI GSHAVNGVAR 480
  481 IHSEIVKQSV FKDFYELEPE KFQNKTNGIT PRRWLLLCNP GLANTIVEKI GEEFLTDLSQ 540
  541 LKKLLPLVSD EVFIRDVAKV KQENKLKFSA FLEKEYKVKI NPSSMFDVHV KRIHEYKRQL 600
  601 LNCLHVVTLY NRIKRDPAKA FVPRTVMIGG KAAPGYHMAK LIIKLVTSIG DVVNHDPVVG 660
  661 DRLKVIFLEN YRVSLAEKVI PAADLSQQIS TAGTEASGTG NMKFMLNGAL TIGTMDGANV 720
  721 EMAEEAGAEN LFIFGLRVED VEALDRKGYN AREYYDHLPE LKQAVDQISS GFFSPKEPDC 780
  781 FKDIVNMLMH HDRFKVFADY EAYMQCQAQV DQLYRNPKEW TKKVIRNIAC SGKFSSDRTI 840
  841 TEYAREIWGV EPSDLQIPPP NIPRD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle