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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60360026
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPKRPWFLRT PMNILFSPRM RKVSVLLFLA WVCFLFYAGI ALFTSGFLLT RLELTNQSSC  60
   61 QELPGPGPLP WGSHGKPGAC WMPSRFSRVV LVLIDALRFD FAQPQRSHVP GEPPVSVPFL 120
  121 GKLGSLQRIL ESQPHHGRLY RSQVDPPTTT MQRLKALTTG SLPTFIDAGS NFASHAIVED 180
  181 NVIQQLNSAG RRVVFMGDDT WRDLFPGAFS QAFFFSSFNV RDLHTVDNGI LEHLYPTLDG 240
  241 GSWDVLIAHF LGVDHCGHKH GPHHPEMAKK LSQMDQVIQG LIERLENDTL LVVAGDHGMT 300
  301 MNGDHGGDSE LEVSAALFLY SPTALFPSVP PEEPEVIPQV SLVPTLALLL GLPIPFGNTG 360
  361 EVMAELFSGG SDSSHPHSSA LAQVSALHIN AQQVSRFLHT YSAATQDLQV KELHRLQTLF 420
  421 SKASARYQHF LRDPQEAEAA LSTLTAEFQQ FLRGARALCI ESWARFSLVR MAGGAALLAA 480
  481 ACLLCLLASQ LAVAPGFLFR PLLLIPVGWG LTWTILYAGV SVTTGSKIDL VVLGAVAAAG 540
  541 SLLPFLWKAW VSRGSKRPLA PLLPVPRPVL ILLLIRLATF FSDSFVVAEA RATPFLLGSL 600
  601 VFFLVAQLHW EGQLLPPKPL TMSRLGSSAP TAPPRHSGAH ALWLGIGLLL FTRLAGLFHR 660
  661 CPEETPACRS SPWLSPLASM VGGRAKNLWY GACVGALVAL LVVVRLWLRR YGNLKSPEPP 720
  721 VLFVRWGMPL MVLGTAAYWA LASGAEEAPP RLRALVAGAS AVLPRAVMGL AALGLVLLLW 780
  781 RPVTVLVKAG AATSRTRTIL TPFSGPPTSQ ADLDYVVPQI YRHMQEEFQG RLERTKAQGP 840
  841 ITVAAYQLGS VYSAAMVTAL LLLAFPLLLL HVERVSLVFL LLFLQSFLLL HLLAAGTPVA 900
  901 TPGPFTVLWQ AVSAWVLLAT QTFYSTGHQP VFSAIHWHAA FVGFPDGHGS STWLPALLVG 960
  961 ANTFASYLLF AVGCPLLLLW PFLCERQGPK RRQPLPGSES EARVRPEEEE EQQEPLMEMR1020
 1021 LRDAPNHFNA ALLQLGLKYL FILGAQILAC ALAASILRRH LMVWKVFAPK FIFEAVGFIV1080
 1081 SSVGLLLGIA LVMRVDVAVS SWFKKLVLAQ QR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle