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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67678131, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAVVLALTV ALVASQQMNL VPEFAHDKTY VYKYEALLLG GLPQEGLARA GIKVSSKVHL  60
   61 SAMTENTYLM KLMDPLLYEY AGTWPRDPFV PATKLTSALA AQLQIPIKFE YANGVVGKAF 120
  121 APAGVSPTVM NLYRGILNIL QLNLKKTQNI YEMQEAGAQG VCRTHYVINE DPKTNHIIVT 180
  181 KSKDLSHCQE RIMKDVGLAY TERCAECTKR VKSLIETATY NYIMKPADNG ALIAEATVEE 240
  241 VYQFSPFNEI HGAAMMEAKQ TLAFVEIEKT PVVPIKADYM PRGSLQYELA SEILQTPLQL 300
  301 MKIKDAPAQT VEVLKHLVAN NKDMVHDDAP FKFVQLVQLL RVATLEKIEA IWSQFKDKPV 360
  361 YRRWLLDALP AVGTPVIIKF IKEKFLAGEF TTPEFIQTLV IALQMVTADI ETIQMTASLA 420
  421 THEKFASIPA LREVVMLGYG SLIAKHCTAV PTCPAELLRP IHEIATEAIS KNDIPEITLA 480
  481 LKVMGNAGHP SSLKPIMKLL PGLRTAANAL PVKVQVDAIL ALRNIAKKEP KLVQPVALQL 540
  541 VLDRALHPEV RMVACIVLFE AEPSVALISS LAGALRTEPN MHVSSFAYSH IKSLTRITAP 600
  601 DMASVAGAAN VAIKLMNCKL DRLNYRYSRA FHMDYYYTPL MIGAAGSAYM INDAATILPR 660
  661 AVVAKARAYL AGAAADVIEF GVRTGGINEA LLKSPAAEES VDRITKIKRT LKALTNWKAL 720
  721 PTDRPLASAY FKVFGQEVAY VNFDKSIIEE AIPMVTGPKP RALLKEALKA LQEGIAFQYA 780
  781 KPLLAAEVRR IFPTAVGVPM EFSWYTAAVA AASVNVQATI TPALPEKLES MTYEQLKKTD 840
  841 VQFQAEARPS VALQTFAVMG VNTAFIQAAV MARGKIRTIA PGKVAARADI LKGNYKVEAL 900
  901 PVELPEHIAS ASFETLAVVR NIEDHSAERS VPFVPELSLQ NSQASYAGDL SSEVSPDASV 960
  961 RAPAPFDRTL CYAVPYIEIK GCVEVHSHNA ALIRNSTLFN IIGHHTARAA ISRAEGPAVE1020
 1021 RLEFEVQVGP RAAERLVKQI NIIDDDTPEG QAFLLKLREI LDTEAKNTPV SSESSSSSRN1080
 1081 SRSSSSSSTS TSTSSSSSSS SSSSSSSSSL SSSRMSKTAT IIEPFRKFHK DRYLAHHSAT1140
 1141 KDTSSGSAAA SFEQMQKQNR FLGNDIPPVF AIIARAVRAD QKLLGYQLAA YFDKPTARVQ1200
 1201 LIASSIAEND NMKICADGAL LSKHKVTGKF SWGAECKQYA VFAKAEAGVL GEYPAARLEV1260
 1261 EWERLPKIVT TYAKKVCKHI LNAAYNTGFR FEKATNSEKE IELTAALPSQ KSLNFIARIP1320
 1321 EITMSKRDIH LPITVPINPD GTFSINEDFL SWIHKHIMEE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle