YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66841016, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKPCDACHV SSAAVFCRAD AAYLCVGCDG KVHGANKLAS RHERVWMCEV CEVAPAVVTC  60
   61 KADAASLCVA CDTDIHSANP LAQRHERVPV TPLFESASPL RGPDFCVLVS ENGCHDLLKG 120
  121 CEDASVVEAV SWLLPHPKIS TNSIIRGSAA ADEMGSSPFH DRPFSPKPKK QKVELPADIF 180
  181 SDVDPFLDLD DATVTGIQPD SLVPVHMPEC SEDTDSLAHS MDPSFTKFPL SAKSGYSYGT 240
  241 STLTQSISCS SLDAAVVPDS SLSDISTPYL DSQSSQDMSA RLPHQTGGPI DTVDREARVL 300
  301 RYKEKRQKRK FEKTIRYASR KAYAESRPRI KGRFAKRTDS DMEQFGSVDS SFGVVPSF

Type	Start	End	Confidence
Signal Peptide	1	21	0.76
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	358	0.99