YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134024891, gi...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEETRQQKN ATTLQAGPAE VDHSNLYAFN MRVTQTIGRQ LAQIGDEMDN KWRQEPPVPW  60
   61 QNLNFGIYPY VLSRRVFSGR ILANLWGSKI MPIFRTSWLL PQLQNGCQEA RKWAAWVSNL 120
  121 HVSDWSRSTT YTLASALLLV TVSIFLVNWN EYEG

Type	Start	End	Confidence
Cytoplasmic	1	128	0.74
Transmembrane Helix	129	149	0.85
Non-Cytoplasmic	150	154	0.66