YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RSAD2_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTSNQLGFA RLLMQLCVKN VQSFFLALLR WLSMQVSGAH VQQTPARKIS RPESRTSKQK  60
   61 EGSRAPFTTP SSVNYHFTRQ CNYKCGFCFH TAKTSFVLPI EEAKRGLRLL KEAGMEKINF 120
  121 SGGEPFVHQK GSFLGELVLY CKQELQLPSV SIVSNGSLIR ESWFQKYGDY LDILAISCDS 180
  181 FIEETNQLIG RAQGRKSHLD NLHKVRNWCR EYKVAFKINS VINTYNVEED MTEQITALNP 240
  241 VRWKVFQCLL IEGENAGENS LREAEKFVIS DQQFQDFLER HQSIQCLVPE SNQKMRDSYL 300
  301 ILDEYMRFLD CREGRKDPSK SILDVGVEEA IKFSGFDEKM FLMRGGKYVW SKADMKLEW

Type	Start	End	Confidence
Signal Peptide	1	38	0.62
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	359	0.99