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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|182889794, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGIASTVAK KRALAAGFGT NANATKYLNQ DFEALRSECR ARGTLFSDPT FPAAPESLGF  60
   61 KELGPNSSKT RGLVWKRPGE LCQKPRFIVG GATKTDICQG ALGDCWLLAA IASLTQNEDV 120
  121 LARVVPNGQE FDGTYAGIFH FQFWQFGEWV DVVIDDRLPV KDGELLFVYS AEKNEFWSAL 180
  181 LEKAYAKVNG CYEALSGGST SEGFEDFTGG IAESYEIRKA PTNLFQIIQK ALEAGALLGC 240
  241 SIDITSAADS EAITRQKLVK GHAYSLTGAT EVNYRGRKEK LVRMRNPWGQ VEWTGAWSDN 300
  301 SPEWNSVAAS ERPDASAEDG EFWMAFSEFL TNYSRIEICT LTPDAITDDS VKHWAVTNHD 360
  361 GTWRRGSTAG GCRNNPYTFW MNPQFVVKLD EENVEDKEKG CSFVVGLIQK NRRRLRKTGE 420
  421 DMNTIGFAIY ELPQEFHGQR EVHLDKNFFL THGQKARSET FINLREVCTR FHLPPGEYLI 480
  481 VPSTFEANKD GDFCLRVFSE SQSETQHCDD PVDAELPDET VSDDQVDSKF RGMFVKLAGP 540
  541 DMEISPLELM TIFNKIIAKR TDIKSSTFTL DTCRVMVNLM DDSGNGKLGL GEFATLWKKV 600
  601 QRYLEIFKHN DLDSSGTIST PELRMALKEA GFCLNNTLFQ LMVARYAEKD MTLLFDNFVS 660
  661 CLMRLEMMFR AFKRLDPHKS GFIELNFNQW LNLTMI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle