YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62531120
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTEVVKTTSG DYVVMSVYFD LSRRMGYFTI QTYIPCTLIV VLSWVSFWIN KDAVPARTSL  60
   61 GITTVLTMTT LSTIARKSLP KVSYVTAMDL FVSVCFIFVF SALVEYGTLH YFVSNRKPSK 120
  121 DKDKKKKNPL LRMFSFKAPT IDIRPRSATI QMNNATHLQE RDEEYGYECL DGKDCASFFC 180
  181 CFEDCRTGAW RHGRIHIRIA KMDSYARIFF PTAFCLFNLV YWVSYLYL

Type	Start	End	Confidence
Non-Cytoplasmic	1	26	0.54
Transmembrane Helix	27	48	0.90
Cytoplasmic	49	55	0.48
Transmembrane Helix	56	75	0.68
Non-Cytoplasmic	76	86	0.67
Transmembrane Helix	87	109	0.83
Cytoplasmic	110	203	0.83
Transmembrane Helix	204	225	0.87
Non-Cytoplasmic	226	228	0.77