YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66910432
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSCGLLSVV LALAVGLVSC TGNLAGFQET LRNKMRAVGR NGGGRAGHGR HLTRYPLYMM  60
   61 HLYRTLLTGD EKHFSHENPT LYESDSVLSL VAKSCHQVGD KFAVTFDMSS ISASDDVQRA 120
  121 ELRIRLPHLR SELEVDIYHA STPECERSPC EEVRVHLGTL NANPINSTFR SSWRIFNITA 180
  181 LLKYWLHQSE RVPFEEPTQM PPMAEGHKSV HHPTVNRVMM VVYSKQNRAK TSTLIRTAEH 240
  241 SKYVALDRAG GGSEPVPRRH RRNHRTDDRV RDAAAGMIPG VSHEGGEKKP LCKKVDMWVD 300
  301 FDQIGWSDWI VYPKRYNAYR CEGSCPTPVD ETFTPTNHAY MQSLLKLHHP DRVPCLSCVP 360
  361 TRLAPLSMLY YENGKMVMRH HEGMVVAECG CH

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	392	0.99