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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VM3VA_MACLB
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQVLLVTIS LAVFPYQGSS IILESGNVND YEVVYPQKVT AMPKGAVKQP EQKYEDAMQY  60
   61 EFKVKGEPVV LLLEKNKDLF SEDYSETHYS PDGREITTNP PVEDHCYYHG RIQNDADSSA 120
  121 SISACNGLKG HFMLQGETYL IEPLKLPDSE AHAVYKYENV EKEDEAPKMC GVTQTNWESD 180
  181 EPIKKASQLN LTPEQRRYLN SPKYIKLVIV ADYIMFLKYG RSLITIRTRI YEIVNILNVI 240
  241 YRVLNIYIAL LGLEIWNNGD KINVLPETKV TLDLFGKWRE RDLLNRRKHD NAQLLTDINF 300
  301 NGPTAGLGYV GSMCDPQYSA GIVQDHNKVN FLVALAMAHE MGHNLGMEHD EIHCTCGAKS 360
  361 CIMSGTLSCE ASIRFSNCSR EEHQKYLINK MPQCILNKPL KTDIVSPAVC GNYLVELGED 420
  421 CDCGSPRDCQ NPCCNAATCK LTPGSQCADG ECCDQCKFRR AGTVCRPANG ECDVSDLCTG 480
  481 QSAECPTDQF QRNGQPCQNN NGYCYSGTCP IMGKQCISLF GASATVAQDA CFQFNSLGNE 540
  541 YGYCRKENGR KIPCAPQDVK CGRLYCFDNL PEHKNPCQIY YTPSDENKGM VDPGTKCGDG 600
  601 KACSSNRQCV DVNTAY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle