YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68534966, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGVQPLDEN VGNAPGRRLL RNKLLLVASV IQGLGLLLCL TYICLHLYAQ VPSQYPPIQS  60
   61 IKVQFTKCEN DNGFIITPSS KDGTMKVQNN SIIINCDGFY LISLKGYFSQ ELSLMLQYRK 120
  121 GRKPLFSLNK VKSVDSVTVA DLAFKDKVFL NVTTHSASCE DIQVNGGELI LIHQNPGGFC 180
  181 VY

Type	Start	End	Confidence
Cytoplasmic	1	24	0.96
Transmembrane Helix	25	49	0.91
Non-Cytoplasmic	50	182	0.97