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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62339281, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPRALSPLA SLRLRWLLAC GLLGPVLEAG RPDSEQTVHL SSYEIVTPWR LSRERREALR  60
   61 PSSKQISYVI QAQGKQHIIH LERNTDLLPN DFVVYTYDEE GSLLSDHPNV QSHCHYRGYV 120
  121 EGVPNSAVAV SACFGLRGLL HLENASFGIE PLHNSSHFEH VFYPMDDVHQ EPLRCGVSNR 180
  181 DTEQEATQGE EEEHPSVTQL LRRRRAVLPQ TRYVELFIVV DKERYDMMGR NQTAVREEMI 240
  241 RLANYLDSMY IMLNIRIVLV GLEIWTDRNP INIIGGAGDV LGNFVQWREK FLITRRRHDS 300
  301 AQLVLKKGFG GTAGMAFVGT VCSRSHAGGI NVFGQITVET FASIVAHELG HNLGMNHDDG 360
  361 RECFCAAKSC IMNSGASGSR NFSSCSAEDF EKLTLNKGGS CLLNIPKPDE AYSAPSCGNK 420
  421 LVDPGEECDC GTPKECELDP CCEGSTCKLK SFAECAYGDC CKDCQFLPGG SMCRGKTSEC 480
  481 DVPEYCNGSS QFCPPDVFIQ NGYPCWNSKA YCYNGVCQYY DAQCQVIFGS KAKAAPRDCF 540
  541 IEVNSKGDRF GNCGVSGSNY KTCATGNALC GKLQCENVQE MPVFGIVPAI IQTPSRGTKC 600
  601 WGVDFQLGSD VPDPGMVNEG TKCDAGKICR NFQCVNASVL NYDCDIQGKC HGHGVCNSNK 660
  661 NCHCEDGWAP PHCDTKGYGG SVDSGPTYNA KSTALRDGLL VFFFLIIPLV AAAFFLFIKR 720
  721 DELRKTFRKK RSQMSDGRNQ ANASRPPGDP SVSRPPGGPS VSRPPGGPNV SRPPGGPNVS 780
  781 RPPGGPSVSR PPPVHGNRFP VPTYAIKQPP QFPSRPPPPQ PKIPSQGNLV PARPAPAPPL 840
  841 YSSLT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle