YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67083289
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLRSAAVC FLAILFIVIN LFSTVSLEEA CHSFGGGQVY PQEFTKASGH NIHWSKAQIS  60
   61 KPAPDFTGTA VVDGEFKEFK LSDFKGKYLV FFFYPLDFTF VCPTEIIAFS DRVKEFKALN 120
  121 AEVIACSVDS PFTHLAWINT PRKQGGLGPI KIPLLSDLTH QISKDYGVYL EDLGHSLRGL 180
  181 FIIDDKGKLR QITMNDLPVG RSVDETLRLV QAFQYTDKHG EVCPAGWKPG GDTIIPNPED 240
  241 KLKYFSKVDE L

Type	Start	End	Confidence
Signal Peptide	1	27	0.93
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	251	0.99