YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125569579, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPEEAEAVL ETIWDLHDKV SDAIHALSRA HFLRAVRRHS KPAEGLVRVK GGDGVDDEAA  60
   61 ALDAVAEEAR SLHAIRAALE DLEDQFECFL AVQSQQQAER DISLARLEQS RIMLAIRLNG 120
  121 HRGVNKKIID EALDFVRNVC HGVWPSLSIN KPAKLGSHSG ADSKNANFLG QMVASSVALA 180
  181 RNSFSIKTLG GLLGHTGVLA IGMITLLQLH WLSSGQQSPS TCRYSYKMIS QESSSQFETA 240
  241 MDTRISDLDV FLARG

Type	Start	End	Confidence
Cytoplasmic	1	188	0.87
Transmembrane Helix	189	211	0.88
Non-Cytoplasmic	212	255	0.89