YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56783875, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.36
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVYTFVCRS SGEEWTAKQL KGELEASAAT PYELQRRLVA AASAADSAAG VQSSFAMVSP  60
   61 SSAVFQVIIG AVGGGAAIGG AAAGGAAAGG AAAEAPKAEE KKEEEKEESE DDLGFSLFD

Type	Start	End	Confidence
Cytoplasmic	1	37	0.77
Transmembrane Helix	38	56	0.36
Non-Cytoplasmic	57	62	0.43
Transmembrane Helix	63	92	0.74
Cytoplasmic	93	119	0.57