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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66911963, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQHAMGDKH FLSLPKHLFT STSSTTDSGC DTPPSSRASP ASLRSAHGAL GSSSQPLFEP  60
   61 QVEKRSSQAA REVQYLSSGP QSTLCGWQSF TPKCLQVFNT PKGFLFFLCA ASFLQGMTVN 120
  121 GFINTVITSI ERRFDLHSYQ SGLIASSYDI AACLCLTFVS YFGGNGHKPR WLGWGALVLG 180
  181 IGSLVFALPH FTAGRYEVEI DDEGLGTETG TCLTNQSQVE CKDRASGLSS YRLIFMLGQL 240
  241 LHGVGATPLY TLGVTYLDEN VKSSYSPIYI AIFYTAAILG PAAGYLIGGA MLNVYTEVGQ 300
  301 RTELTTDSPL WVGAWWIGFL GAGIAAFLIA IPILGYPRQL PGSQRYVVMR AAETQQLKDH 360
  361 SRDNPAFGKT VRDLPLSVWI LLRNPTFILL CLAGATEATL IAGMSTFGPK FFEAQFSLSA 420
  421 SEAATLFGYL VVPAGGGGTL LGGFLVNKFK LRGSGIIRFC LFCTLTSLLA FFVFLMHCPN 480
  481 VHMAGVTTGY VGSLLPKGQL DLKAACNALY CCQPRHYSPL CGSDGTMYYS PCYAGCPEGA 540
  541 VTGPGGQKVY RGCSCILEKA SSGWGNATAG KCASTCQSKP LLLVLVFVVI IFTFLSSIPA 600
  601 LTATLRCVCD RQRSFALGIQ WIVVRTLGSI PGPIAFGWVI DKACLLWQDQ CGHQGSCFVY 660
  661 KNEAMSRYLL IAGLTFKVLG FLFFVAAYFL YKSPSVSSDG LEASLPSQSS ASDSPTEQLQ 720
  721 SNV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle