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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACB5A_DANRE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGDSNPLYE QRFNAAVKVI QNLPPNGSFQ PSHDMMLKFY SYYKQATQGP CNIPRPGFWD  60
   61 PVGKAKWDAW SSLGEMPKEE AMAAYVDDLK LILESMPVSS EVEELLQVIG PFYELVDEKR 120
  121 KITQVSDLST GFGNLLSSPP KCVTKSIIRT MEMNGNLEGY PIKTAETLKV KSIDLEDRED 180
  181 DDDEDEEGER DEVEEFKEVE KASQPKKRVS AGRPKGPVSN GSISQHKGLS NGTHGSKSDL 240
  241 NRQESEENTE HMNHDGGIVE LNGHLNSEKD KEEDVSSSHH VASDSDSEVY CDSVDQFGGE 300
  301 DGSEIHMNRS LEVLEESHST PSSTGDIRSQ DDELLGREEG VQHGGEDGRG SRGGAQRREL 360
  361 PVKRSDSSVV RRGRGSRSPA SGSGSAGPQQ GSGGDGERWG ADGPMTENLN EQIICALARL 420
  421 QDDMQSVLQR LHTLEALTAS QARSLALPSD YLTTPANRNK KKPSWWPFDV SLGTVAFAVV 480
  481 WPFVVQWLIR VYVQRRRRRI N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle