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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|63101978, gi|...
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVKRHKVFL VCLLGICVVS FLHYYTALHN ISLLQEISSP SSHLNTLKML RGFFWNFPTD  60
   61 DIPFKQDRQK SSHQKDFVDL PDLPDAKQVV TNLHKQIFEL RDDSTPFFTH TESGALCFHE 120
  121 GTDLAAFASQ GRLLKHYEER TPLKDDLINA GKKDVRCPCR QGWHGPQCGI PTVVYHSNLP 180
  181 SKSKVTPRKI PRRVINAINI NHEFDLLHTR FHELADVVDT FLVCESNFTA YGDARPLYLK 240
  241 HLILNGTFDY IKHKILYIFL DHFPDGGRMD GWIADDYLRT YLTKNGMARI QGLKPDDVFI 300
  301 LNDADEIPSR DGILFLKLYD GWTEPVGIHL RKSLYGFFWR QYGTLNVLSA CTAAMLFKVY 360
  361 KGDGIYLRRR SYYTMSGFRE YENSTGRILI PWAIGSPVHY AGWHCSWCFK PEGIYYKLVS 420
  421 AQNGDFPRWG DYGEKRKLSY IKDLIRTGGW FDGSEPDYPP TDPKEHMYAP KYLLDNYDKY 480
  481 HYLLENPYAK GKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle