YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62202738, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPKRVCIV GSGNWGSAIA KIVGANARNN SKFDSTVNMW VFEEMVNGRK LTEIINTEHE  60
   61 NVKYLPGHKL PENVVAVADL VEAAKSADIL LFVIPHQFIG RVCDTMKGKI KADALGMSLI 120
  121 KGVDEGPDGL KLISEVIEEK LGISMSVLMG ANIANEVADE KFCETTIGCR DEAHGALLKE 180
  181 LMQTHHFRVT VVQEADVVEI CGALKNIVAV GAGFCDGLGF GDNTKAAVIR LGLMEMISFA 240
  241 RLFCTAGSVS PATFLESCGV ADLITTCYGG RNRRVAEAFA KTGKSLEDLE KEMLNGQKLQ 300
  301 GPATAAEVHT ILKNKGVLAR FPLFNAVFEI CYEGRPVTEF IHCLQNHPEH Q

Type	Start	End	Confidence
Signal Peptide	1	20	0.54
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	351	0.99