YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157886063, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRYETTLVD MEAGVGGVYQ TTVAPVPVNS SRSWIWKTLA AVAFVGLCVV AAFFFTWHVM  60
   61 KPNEEGQKPN REHLKQQITT PSASSDHGKV LKQIAQSTKA AIHLHGDPSG QSLKWVGGVD 120
  121 QAFQQGGLRL ENNEIIIPKD GLYFVYSQVS YETLCVEDVE GDGQKYLSHT INRYTDAVRE 180
  181 KMPLQNSANS VCQSLDGKTS YSTIYLGAVF DLFGDDRLST HTTRVGDIEN NYAKTFFGVF 240
  241 AL

Type	Start	End	Confidence
Cytoplasmic	1	37	0.75
Transmembrane Helix	38	60	0.90
Non-Cytoplasmic	61	242	0.78