YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66773092, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFIYLLSWL SLVVQICFVT LAIAAGLYYL AELIEEYTVA TSRIIKYMIM FSTAVLVGLY  60
   61 LFEGFPTLMV GVGLFTNLVY FGLLQTFPYI MLTSPNFILS CVLVVLNHYM AFQYFAEEYY 120
  121 PFSEVLAYFT ICLWVIPFSF FVSLSAGENV LPSTMQQGDD VVSNYFTKGK RGKRSGILLV 180
  181 FSFLKEAVVP SRQKMY

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.79
Transmembrane Helix	7	31	0.88
Cytoplasmic	32	43	0.77
Transmembrane Helix	44	75	0.73
Non-Cytoplasmic	76	86	0.45
Transmembrane Helix	87	112	0.79
Cytoplasmic	113	124	0.47
Transmembrane Helix	125	147	0.89
Non-Cytoplasmic	148	196	0.52