YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	B9D1_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSNNPAVFL LMVNGQIESA DFPEYDDLYC KYCFVYGHDW APTSGLEEGI SQITSKGRLS  60
   61 QSLVWNFPLD ITFKSTNPFG WPQIVVSVYG PDTFGNDVVR GYGAVHIPFT PGKHTKTIPM 120
  121 FVPESTSRLQ KFTSWLMGRR PEFTDPKVVA QGEGREVTRV RSQGFVTLQF NIVTKDMKKL 180
  181 GYDTTSTEHS PAGLTRASQQ L

Type	Start	End	Confidence
Signal Peptide	1	19	0.63
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	201	0.99