YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56207682, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNYIKNFY EGCLRPPTVI GQFHTLFFGS VRTFFLGVLG FAVYGNEALH FSCDPDKREL  60
   61 NLYCYNQFRP ITPQVFWALQ LVTVLVPGAV FHLYAACKNI DQEEILHRPM STVFYIISVL 120
  121 LRIILEVLAF WLQSHLFGFL VDPIFMCDVT GLGKILNVSK CMVPEHFEKT IFLSAMYTFT 180
  181 IITILLCIAE IFEILFRRLG YLNQPMT

Type	Start	End	Confidence
Cytoplasmic	1	20	0.94
Transmembrane Helix	21	43	0.87
Non-Cytoplasmic	44	75	0.94
Transmembrane Helix	76	96	0.94
Cytoplasmic	97	111	0.87
Transmembrane Helix	112	132	0.91
Non-Cytoplasmic	133	172	0.65
Transmembrane Helix	173	196	0.86
Cytoplasmic	197	207	0.61