YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63101430, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGSVSRFD FLVVGGGSGG LAGARRAAEL GATTAVIESH RLGGTCVNVG CVPKKVMWNT  60
   61 STHAEYLHDH EDYGFEGAKA HFSWQIIKHK RDAYVSRLNQ IYRSNLEKGK IEFIHGYARF 120
  121 TDDPEPTVEV NGKKYTATHI LISTGGHPST VSEDDVPGSS LGITCDGFFE LESCPKRSVI 180
  181 VGAGYIAVEM AGILSTLGSK TSIIIRQGGV LRNFDALISS NCTKELQNNG IDLRKNTQVK 240
  241 SVKKNGKGLS ITLVTKDPDD KDSQEKFDTI NDVDCLLWAI GREPNTAGLN LSQIGVKLDE 300
  301 RGHIVVDEFQ NTSRPGVYAV GDVCGRALLT PDEAVKTYGK DKVKVYTTSF TPMYYAITSR 360
  361 KSQCIMKLVC AGENEKVVGL HMQGFGCDEM LQGFAVAVNM GATKADFDRT IAIHPTSSEE 420
  421 LVTLR

Type	Start	End	Confidence
Signal Peptide	1	24	0.67
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	425	0.97