YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63101426, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLDSLYGPV GLGVLAGLGC GLCVGWHLSG RFGRSSRSMM TALGNSASNG SETSVMGESG  60
   61 EFKMILVVRT DLKMGKGKVA AQCSHAAVSA YKQVQRRNPE LLKQWEYSGQ PKVVVKAPDE 120
  121 DCLLDLLAHA KEVGLPVSLI QDAGRTQIAP GSRTVLGIGP GQADLIDKVT GHLKLY

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.55
Transmembrane Helix	7	30	0.88
Cytoplasmic	31	176	0.57