YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66267283, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYQTIRQEY LQIPVVTRAY TTACVLTTAA VQLELITPFQ LYFNPDLILR NYQVWRLITN  60
   61 FLFFGPVGFN FLFNMIFLYR YCRMLEEGSF RGRTADFVFM FLFGGLLMTI FGTFVNLVFL 120
  121 GQAFTIMLVY IWSRRNPNVR MNFFGLLNFQ APFLPWVLMG FSLLLGNSII VDLLGIAVGH 180
  181 VYYFLEDVFP NQPGGGRWLR TPSILKMLFD TPEEDANYNP LPEDRPGGFA WGEGQRLGG

Type	Start	End	Confidence
Cytoplasmic	1	15	0.91
Transmembrane Helix	16	36	0.84
Non-Cytoplasmic	37	56	0.83
Transmembrane Helix	57	79	0.89
Cytoplasmic	80	96	0.83
Transmembrane Helix	97	123	0.86
Non-Cytoplasmic	124	152	0.67
Transmembrane Helix	153	176	0.81
Cytoplasmic	177	239	0.75