YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85775968, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQRKLGTQG LSVSAVGLGC MGMSDFYGGA DERESVATIH RALELGVTFL DTADMYGPFK  60
   61 NEELVGRAVR GRRDQVVVAT KFGNERRADG AFVGINGRPE YVRAACDASL RRLGVDHVDL 120
  121 YYQHRVDPTV PIEDTVGAMA GLVKDGKVRY LGLSEAAPAT IRRAHAVHPI SALQTEYSLW 180
  181 SRDPEDELLP TLRELGIGFV PYSPLGRGFL TGRFRSPDDL PEGDFRRTSP RFQGENFQRN 240
  241 LDLVDRIREM ASAKGVSASQ LALAWVLRRG EDVAPIPGTT TRRHLDENVA AASIRLTPEE 300
  301 LAAIDQVAPK GAAAGERYPP SGMVRVNL

Type	Start	End	Confidence
Signal Peptide	1	22	0.60
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	328	0.99