YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63102052
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDSQNRRINM TYNKHILWAF IAALATGWVL SNDEGCYYGT VMKHSCNWTC MLLTLQWPGS  60
   61 FCIGLTNKTI CKIPLTIQNW TIHGLWPMHT GLCCNCWPIF HSHLQEIEPE LTQLWPSLIK 120
  121 GKHFFNFWRE EWIKHGTCAG CDEAMGSPLL YFQAAVKLRK LFDINSILES SGIKASCEVS 180
  181 YKYDDISKAL TSLLGDNFDL QCVTDSKGRE AWIQLKIHLS RNQTIGCPTE KQDEAFYNLA 240
  241 AYKSPGHPCP KNTTIFFVPI NYDNPHEPCN

Type	Start	End	Confidence
Cytoplasmic	1	11	0.86
Transmembrane Helix	12	31	0.80
Non-Cytoplasmic	32	47	0.84
Transmembrane Helix	48	67	0.66
Cytoplasmic	68	81	0.61
Transmembrane Helix	82	101	0.61
Non-Cytoplasmic	102	270	0.75