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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66267492
Protein type: Globular with Signal Peptide
Type Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSILKVFIA ICFMELVCSR SITSGEPRAK DIRVSRHILT PGYPENATVL VGGHVKLVCK  60
   61 LHQPASTRLQ WFKKDSNRLG PDGSPVLTAL TPLLENLSKV NIFPLVNISL EDAGEYVCKA 120
  121 ENSAGQATRS AWVEVLSEVS EEPTEEPSEH LLLELGDVLK LRCDTNRPGA VQWFKSGVRV 180
  181 QHNARTQIRA AVMEIADVTY EDSGVYVCML RGTKEALRNF TITVADAVGS GDDDEDNGLD 240
  241 DIGPETENDQ VYISRAPYWT HTQRMEKKLY AVPAGNTVKF RCPATGSPLP TIRWLKNGRE 300
  301 FRGEHRIGGI KLRHQHWSLV MESVVPSDRG NYSCVVENKY GSIAHTYLLD VLERSPHRPI 360
  361 LQAGLPKNTT AIVSGDAQFL CKVYSDAQPH IQWLKHIEMN GSRYGPDGIP YVKIVKTGSL 420
  421 NMSEVEVLYL TNISMEDAGE YTCLAGNSIG FSHQSAWLTV LSEEDVAKEV DLMEAKYTDI 480
  481 IIYASGFLAL VMAIVIVVLC RMQVHPSREP FDTLPVQKLS KFPLRRQYSV ESNSSGKSSA 540
  541 SLMRVARLSS SCSPMLAGVM EFELPYDPDW EFPRENLTLG KPLGEGCFGQ VVRAEAYGIN 600
  601 KENQDHMATV AVKMLKDDAT DKDLADLISE MELMKVMDKH KNIINLLGVC TQDGPLYVLV 660
  661 EYASKGSLRE YLRARRPPGM DYTFDVTKVP EEQLTFKDLV SCAYQVARGM EYLASKRCIH 720
  721 RDLAARNVLV TEDNVMKIAD FGLARGVHQI DYYKKTTNGR LPVKWMAPEA LFDRVYTHQS 780
  781 DVWSFGVLMW EIFTLGGSPY PGIPVEELFK LLKEGHRMDK PSNCTHELYM KMRECWHAVP 840
  841 TQKQIQERSA YGCSETRERH PQQSEACGGE EEALQGSQEF INRRIYSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle