YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59862123
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQHCKMLDSL SLLLEKTLLL AHFNFFSTTS SKQERCTKRR EESTYFQRGD LLEVPRTLFT  60
   61 HFGIYLGDNK VAHLMPDILP VLTSNKSHLQ NVVTNKRLLL GVLYKYASVR VDTVEDFAYG 120
  121 SNILLNTMDT TLRKQPLAAE EVARRAEKLV GHFPYSLMWN NCEHFVTYCR YGTAVSLQTD 180
  181 QFCESLKSII RDQRSILLTT VIGMLSMFFV GIAPSTALPT FIIPFILWMA G

Type	Start	End	Confidence
Cytoplasmic	1	195	0.92
Transmembrane Helix	196	223	0.84
Non-Cytoplasmic	224	231	0.74