YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66772041
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KHKAPLENHY PPANLVMALI KITLICCALI AAIECALLPA AVPVGVPLNT EVDPHPQYAF  60
   61 AYNVQDALTG DSKSQQEVRD GDVVKGSYSV VDADGSLRTV FYTADPINGF NAVVQRGPVP 120
  121 VAARPLVAPV AAPILG

Type	Start	End	Confidence
Cytoplasmic	1	18	0.68
Transmembrane Helix	19	41	0.79
Non-Cytoplasmic	42	136	0.82