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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66771973, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTLRQSRKMS RNRRRSFPSS QYEDKTAAAQ PSGSSLRSQS LSRLDISVQN SSIYYNDTRN  60
   61 TRPQMVSVAV GTVSTDILNG RTSFLSLSQS HGSEVDLPSF YESFNPTFLP KLPIRRFPHM 120
  121 LVGASNEPEI SKNQPAIPPS RPIEPISEVP FVEPAFEKKY SRTRGFSKEL STHRDNENEY 180
  181 IESTDEVSQM LSFTSYTDEY DRAEPLITKT QKFYKKRSPL IPKYDSEDSY VVPKETDQQE 240
  241 SGLSFNVTTV QLADTASPES FSEYDGNRTR KQSFDMESKN SKESFDFSRG GRRLGSGMVF 300
  301 IYMVIPPDGG FGWVIMVLSF LAQLIIDGLI FTIGVLLPSI AQDLDVSISS VSFVASVQIG 360
  361 CYFTSGAFSA VLINRFGFRK VAIAGVLCSA VSILASSWSV SLTMLIFFYS VLGGITLSMI 420
  421 WASSQLIVGY YFERYRPMAN GFSCSGGGAG IVLFTFLNSW LVPIIGWRNM LRTQAGLIML 480
  481 ILLMVVAYVE VAPTQVGMYH LPGSSDTSSD EYYGNFYVHD YLRQSAMTAK SRSILSTYEP 540
  541 RPKKKGCAKF CPSCSNCCWR RRKKSQNADE QNLLIRPAPL EREDLFYTGP AEYEKPHSKE 600
  601 NVDGKEFLLM GSDKNTQQVN YGIKNIRVDD EPDRISRVHR ERRWSNENQK KQNSCRNSRF 660
  661 MLTVLKLFDY RLLKQFEFKI LVASAFLFPM GFNIPFVYSS ARTTIPVEYA RMIGPIIGIS 720
  721 NLVMRNILGI LAYKRRSWTL GLCGCGLIFG GVSVLISAFY GENLIWFQFL YGFSYAVAPA 780
  781 VYSTLRGLIY VKYLGLSKLT NAFGITSLAM GMGAFIGTTI AGKLIGITGN YSAAFCFAGL 840
  841 CLIVSGFLKL LLPLLIKCRN RMAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle