YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66771563
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 THPNQSSLIL TSFAMIAQTL FVLGLILSAV VAIPIDPYGL SAPGLTYAAP KLLAAPAISY  60
   61 AAPKLLAAPA ISYAAPAISY APKVLAAPVA VAKVAVAEPY DPNPQYSFSY GVTDHHTGDS 120
  121 KQQEETLVNG VVHGSYSLAE PDGTIRKVTY TADKVNGFNA VVEKKGVAAV AIAKPALAVA 180
  181 AVPAITKIGY ASAPGLSLGG YH

Type	Start	End	Confidence
Cytoplasmic	1	8	0.85
Transmembrane Helix	9	35	0.81
Non-Cytoplasmic	36	51	0.68
Transmembrane Helix	52	68	0.55
Cytoplasmic	69	202	0.71