YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG14394-PB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGLQRVNE NEMKAMDANR YATKKTIAQG MLDIALLTAN ASQLKYILQV GEQHQFYKLM  60
   61 LILISLSIVM QVAAGLLLVI QSLINMHNTK DRNRGFAINH FIDAFIFLSV FCDIMKMNFG 120
  121 LDPAVPHTDV ELLKP

Type	Start	End	Confidence
Cytoplasmic	1	25	0.71
Transmembrane Helix	26	41	0.51
Non-Cytoplasmic	42	58	0.63
Transmembrane Helix	59	80	0.92
Cytoplasmic	81	95	0.65
Transmembrane Helix	96	117	0.74
Non-Cytoplasmic	118	135	0.68