YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66771291, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSGEVKISLE DSPSSGESFA STTSGPCCGS GRDLDIQVHE SHIKDDQFPS RATSELQESK  60
   61 KSNKKCSSDL STENSYAANK NVAEGLMDIA LLSANANQLR FLITYNDKAS TYIYSMIMVI 120
  121 LSLVLQLLVG IMLIFKRRLK RFRNRSYERT NDLLVMGVFM ITVINILLAA FTTTDGGGSH 180
  181

Type	Start	End	Confidence
Non-Cytoplasmic	1	111	0.78
Transmembrane Helix	112	135	0.92
Cytoplasmic	136	152	0.94
Transmembrane Helix	153	173	0.94
Non-Cytoplasmic	174	180	0.90