YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66770967
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSAKLNPAFV NKNLYKIAKM SVLPNAGNNE SSVTAPKMFG DPDLDRMAME YVGNMQRYRE  60
   61 NIIIPKSNGP VKIKTNEEKF IETAVESCGF KCTMACVMGY GLGAALGLFS ASVNPNMADP 120
  121 FANEKKQTAR EVFREMRSTT HSYAKNFALI GCVFSAVECT IESHRGVTDW KNGTYAGGIT 180
  181 GGLIGLRAGV KAGIIGGLGF AAFSTAIDYY MYSR

Type	Start	End	Confidence
Cytoplasmic	1	88	0.95
Transmembrane Helix	89	111	0.66
Non-Cytoplasmic	112	187	0.70
Transmembrane Helix	188	212	0.79
Cytoplasmic	213	214	0.71