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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66576244
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPENMKAKHE GGLYDPQFEH DACGVGFVAN IKGVKSHQII KQGLQVLVNM KHRGATGYEK  60
   61 NTGDGAGILI QIPDKFMRKV CAQRNIELPE PGKYGVGMVF LPPDLTQRRA IEDICRQMVQ 120
  121 AEGQKYLGLR KVPTDNSTLG QTARSQEPVV KQIFVGRGND NMSDLEFERK LYIIRRRIFK 180
  181 RVRFTSGLLG SSFFYISSFS ARTIVYKGML NPEQVEEFYP ELRDPDMESA IAMVHSRFST 240
  241 NTFPSWDRAH PYRFLSHNGE INTLRGNVNW MKAREKNMQS SIFKGALEEI KPILLEEGSD 300
  301 SATLDNAFEL LVMCGRSMAH AAMMLIPEPW SGNESMDPDK RAFYEYHSCL MEPWDGPASV 360
  361 VFTDGIQIGA VLDRNGLRPS RYYITSDDLV VMASEVGVLD IDPEKIIKKD RLQPGRMFLV 420
  421 DTKEGRIISD EEIKKSIASE KPYTEWIERN VIDLASLPER ERMKNPDEDN YSITARQKAF 480
  481 GYTNEDLTLQ IRPMAQNGTE CIGSMGNDTP LAVLSNRPRL LYDYFKQLFA QVTNPPIDSI 540
  541 REEIVTSTTV MLGAEGNLLE SDEINCRRIR IPHPILTDED LEKIRGIDKP GFKAITLPIF 600
  601 YNVAEGGRGI QETMQDLYRQ AEKAINQEGV NIIILSDKGE LEKSRAPIPV LLALAGFHHF 660
  661 LISAGLRTKV GLIVESGEPR TVHHFSMLIG YGAGAINPYL AFETIRQQVA QGRITHDEKK 720
  721 AIKNYVKAAV KGVVKTMAKM GISTVQSYRG AQIFEAVGLN TEVVDTYFTK TPSRIEGIGL 780
  781 DTLADEVRKR HEAAFPPGGN KVNRGLEAGG DRKWRHDGEF HLFNPETIHY LQHSCRTGDY 840
  841 ELFKKYEKLI DDQSEHYCTI RGLMDIRFSE KPIPIDEVEP VEAIVKRFKT GAMSYGSISK 900
  901 ESHETLAIAM NRLGGKSNTG EGGEEPDRFV RDANGDSRMS AIKQVASGRF GVTSEYLTNA 960
  961 EEIQIKMAQG AKPGEGGQLP GTKVYPWIAK TRHSTPGVGL ISPPPHHDIY SIEDLAQLIF1020
 1021 DLKNANRSAR INVKLVSTVG VGTIAAGVAK AHADVVLISG HDGGTGASPI SSIMHAGMPW1080
 1081 ELGLAETHQT LMLNNLRSRI VVEADGQLKT ARDIVIAAML GAEEFGFATT ALVVMGCIMM1140
 1141 RCCQDDSCPV GIATQNPELR KNFKGKPEHV ENFMRFLAQG VREYMAKLGI RTLNELVGRS1200
 1201 DLLATSRTIK HWKAKGVDLS KILHQVDTGD NDTPYCTITQ DHGIEESLDM RVLMAICEPA1260
 1261 IKRGEKVSTT LPIKNTNRAA GTIVGHEVTK AYGSKGLPDD TIHLKFIGSA GQSLGAFIPK1320
 1321 GMTIELVGDA NDYIGKGLSG GRIIAYPPKS SKFVPEENII VGNVAFYGAT SGEAFIRGMA1380
 1381 GERFCVRNSG MEAVVESVGD HGCEYMTGGK VVILGKTGRN FAAGMSGGVA YVYDVDGAFT1440
 1441 GRCNLEMVSL SAVEAEDELE WLRSKIEQHV EVTGSELGKG LLATWPNASQ RFVKVLPNDY1500
 1501 KRAIDAMKEV EAMGMTGDEA VMAAFEKNVH DPSRASGN

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