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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RETST_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFAVVAIFL ALVAFLYRYV VGSGPNPFAI DTREPLKPMV FDRKLKNKVL KQGFLASRVP  60
   61 EDLDAVVVGS GIGGLAIAVL LAKVGKKVLV LEQHDRAGGC CHTFKEQGFE FDVGIHYIGE 120
  121 LSNHKPLRCI IDQMTNGQLQ WDPLENPFDN VVIGPPENRR IYQIYSGRKR YMDELKKCFP 180
  181 GEEKAIDEYV RLCKEVGQGV WVMVLLKFLP TPIANFLVRT GLANRLTSFS RYASRSLTDV 240
  241 VNELTQNKDL RAVLSYIFGT YGKIPKEASF SMHSLIVNHY MNGAWYPKGG ATEIAYHMIP 300
  301 IIEKAGGAVL VRAPVNRILL NDAKEAIGVS VLKGQEEVHV RAPIVISDAG IFNTYEYLLP 360
  361 KDVQTMPAIQ KQLSMLQHGD SGLSIFIGLD GTKEELGLKA DNYFIYPENN IDELLEDYRS 420
  421 GNREESAKKN PLIFVASPSA KDSTWPERTP GKSTLTVVSF ANYEWFEEWK DDKVKNRSTD 480
  481 YKQLKELFIN YILEAVTEIY PKIKDRIEYV DAGTPITNQH YIAAPRGEIY GADHGIPRFS 540
  541 AELNATIRAQ TPIKNLYLTG QDLMLCGFAG ALTGALTCGS VILNRNLHLE AFSLAKRVQN 600
  601 GNNKKKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle