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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47933336
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQVCQICGDD VGLTADGDLF VACNVCAFPV CRPCYDYERK DGNQSCPQCK TRYKMHKGSP  60
   61 RVEGDEGEDG ADDVGNEYHY PPPGSRNEKQ KIAEAMLRWQ MSYGRGEDVG APTSTRQEVS 120
  121 ESQIPRLTNG QSISGELPAL SPEHSVGAPP SSGGGSKRVH PLPYTDASRP AQVRIVDHSR 180
  181 DFNSYGFGNV AWKERVESWK NKQEKNMLQV TNSGDYASEG KGGDVDFGGG ENEDLQMNDE 240
  241 ARQPLSRKVS IPSSKINPYR MVIVIRLFVL CVFFRYRIMH PVNNAYGLWF TSVICEVWFA 300
  301 ISWILDQFPK WLPINRETYL DRLALRYDRE GEPSQLAAID IFVSTVDPLK EPPLVTANTV 360
  361 LSILSVDYPV DKVSCYVSDD GAAMLTFESL SETSEFARKW VPFCKKFNIE PRAPEWYFSL 420
  421 KMDYLKDKVQ PTFVKERRAM KREYEEFKVR INALVAKAQK VPEEGWVMQD GTPWPGNNTR 480
  481 DHPGMIQVFL GHSGGMDTEG NELPRLVYVS REKRPGFQHH KKAGAMNSLV RVSAVLTNGS 540
  541 YLLNLDCDHY INNSKALREA MCFMMDPNLG KSVCYVQFPQ RFDGIDRNDR YANHNTVFFD 600
  601 INLKGLDGIQ GPVYVGTGCC FNRTALYSYD PPTKKKFRVP NCFSMCCGGT RKNKKVDKKI 660
  661 MDDTKTLKQT DNTIPIFNLE DIEEGVEGAG FDDEKSLLMS QKSLEKRFGQ SSVFVASTLM 720
  721 ENGGVHQSAS PAELLKEAIH VISCGYEDKT DWGREIGWIY GSVTEDILTG FKMHARGWRS 780
  781 IYCMPPRPAF KGSAPINLSD RLNQVLRWAL GSVEILLSRH CPIWYGYGGR LKWLERLAYI 840
  841 NTTVYPITSI PLVVYCTLPA ICLLTGKFII PQISTFASLF FIALFLSIFA TGILEMRWSG 900
  901 VGIDEWWRNE QFWVIGGVSA HLFAVVQGLL KVLAGIDTNF TVTSKASDED GDFAELYLFK 960
  961 WTALLIPPTT LLVINIVGVV AGISQAISSG YAAWGPLFGK LFFAFWVIVH LYPFLKGLMG1020
 1021 RQNRTPTIVV VWSVLLASIF SLLWVRIDPF TTQIKGPDLQ QCGINC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle