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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71834478, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLTPDQWR EIVNKKFRFP PELLGAIREG NLNLVSSLLK TGDGIIRQLD DSEDRQWREA  60
   61 LNLSIRLGNE DTMASLLQGV KFDFRQIHEA LLVAVDTNQP RVVKRLLDRL DQEKGNKMDV 120
  121 RSFSMAIFDH SIDDSQFAPG VTPLTLACQK DLYDIVTMLN QKGHEIPWPH KISCACLECT 180
  181 NGRQYDLLKF SLSRINTYRG IASRAYLSIT AEDAMLSAFR LSRDLRKLSK KEPEFKPQYL 240
  241 SLEQVCQEFA VELLGMCRNQ SEVTTILNSC GDRDEDSEDE LDHQTFEEGI PNLARLRLAV 300
  301 NYNQKQFVAH PICQQVLSSI WCGNLSGWRG SRTSWKLLVS FGIFLTMPFL CLIYWIAPKS 360
  361 KLGKILKIPV IKFLLHSASY MWFLITLLGE SIAMEVYRES FATRQHTILH NSFHMVWVVG 420
  421 FFWFECKEVW IEGLRSYFLD WWNCLDVMVL SMYLASFALR LVIMLKVHFL CQLQDNQDEC 480
  481 VYFTETMRDQ WHQEDPQFIS EVLFAVTSML SFTRLAYILP AHESLGTLQI SIGKMIDDMM 540
  541 RFMFILVIIG TAFLCGINNI YVPYIISPNL GKLNETFSFL FWTMFGMADQ TYVDMPAFAL 600
  601 AELVGRILYG IYTLIIVIVL LNMLIAMITN SFQKIEDDAD VEWKFARSKL YLSYFREGLT 660
  661 MPVPFNIIPS PKAVFYLLRG IVKRICCCCF NCNSAPDYPP LTSMKDEGGS GENRIPYRQQ 720
  721 VIRALVQRYI ESARREFEET KRKDVGNRIT ELSKVIGHLH TEMKQIHSNL FNYSGNTKAD 780
  781 PSGDSSFLGK YILGAKNNFK DFNNERRAPP LQETVRHLEP AETNEEPEEE RKEEQNAEEQ 840
  841 IDNTLQTGND DANKIVIEIE SSPDAESGNA ADKMEKAKEG TDLNGDVEES NGDVVEIISE 900
  901 GFKFNFGQTN LVSFLSKRIE EKLEKTVKDN EEELDGGETD VSGDVEESNE ASEDAEVVSE 960
  961 ENKFELNQTS MVSFLAKRFE EKLGGNFKEN MEELNAGGAD VEESNRASEN ANEDAEVVIY1020
 1021 GIKFDLNQTS MVNFLTKRIE EKLEENFTEN MEELNAGGAD VEESNGASEN ANEDAEVVIY1080
 1081 GIKFDLNQTS MVNFLTKRIE EKLDRTFSFT EKQASSPTGS NISQDTGFGS QEFNPSAGSP1140
 1141 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle