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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66171149, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGWAIRLAV GIFLLLLAAT DSRADEVNHC TAARTKTCSE CIQVGAGCAY CPDEVFEHER  60
   61 CDLKENLEAQ KCIKIVNFES SRQIQENVKI NEQLKQSQVS PQLMSMTLLP GEEKEVEMEV 120
  121 FEPTRGPLDL YILMDFSNSM SDDLDNLKRM GEKLARLVGD LSDDYTIGFG KFVDKVTEPQ 180
  181 TDMRPAKLAE PWSNSDPPFS FRNVIKLTSN ITSFRQKLQK ERISGNLDAP EGGFDAILQT 240
  241 AVCQDQIGWR KDSTHLLVFS TESAFHYEAD GANVLAGILD RNDEQCHLNV DGNYTHDVRQ 300
  301 DYPSIPTLVR LLVKHNIIPI FAVTNHSYSY YEKLHEYFPI AELGQLQEDS SNILSILEKA 360
  361 FENIRSKISI RAEDRPKAVE TKIFSQSGTF SEYGNFKITP GQTGKFKVRM KALNQVGEEP 420
  421 VCKVNQADRA GTLRVKPTTF SSAFKINAEV LCPTCDCEKT PVKNAMRCTG HGDLVCGKCQ 480
  481 CYAGWLGPLC NCSASASTDS VMCIEPGKTE PCSGRGDCMC GTCVCYNPNQ FEGPYCQFDK 540
  541 SQCQRFGGFL CNERGSCSMG RCVCSPGWSG EACECPTSND SCRDSKGGIC NDRGVCKCGR 600
  601 CECEHSGLPL SPTCEANFQQ QVGMCEAKRS CVQCQAWSTG ERKGRKCDEC PFKIVRVDEL 660
  661 EEDKNVIETC SFRDEDDDCT YHYNVNYPSN ITDKEHRVLV KKKKDCPPAG FLWLIPLIMF 720
  721 LMLLLGLLLL CCWKYCACCQ SCLALLPCCA RGRMVGFKEK QYLLRQSFLQ NDYLDTPMVR 780
  781 SGPLKSTDVV RWKVADNVHR GTNHPQNQIR PNPKETIQYP VSLRLNRQFS EVLSNPDARD 840
  841 TDVLRREVED NLNDVFLQIP GAQPVQKTLF RTQRNSGKRQ NNTIVDTVLS APRSSYPDIV 900
  901 KLTDKQVQSG NFRDLKVIPG YYTVASDKEA AGAVEFPENV ESVDVRVPLF IKDEDDEKKE 960
  961 LLVEAVDVPV GIAKIGKNHV NITVLKEQAS SVFTFLEPSY TYSRQDGVAN IPIKRQIIED1020
 1021 GRAQVTYSTA DLTAKDKKDY ISVDGDLSYG QGETEKIVPV KLLELGEQDG LLEDKQVKQF1080
 1081 VMDLTNPRQS AKLGRYPRTV ITIADKPESS VMAFKKSTQT FSTTDSLYTI PVERTGNRET1140
 1141 PATVHWRTNK ASRFDISSPL KFAPGEAEKN ILINPRTHPS PIIPEKFNLE LLDPSNNAII1200
 1201 GKRKTTEVIV TDGRGDGKNQ DFQKMEYVTQ TATSPGGRLY SPANIKAVPT GPKNIRLNWK1260
 1261 PSQNANGYKV KYWIYGDPED KAKFMDVKTP QAELTNLDPY CDYEMRVCGY NALGDGNYSD1320
 1321 IIQCQTLEDI PGEPGRLAFN VISPTVTQVS WAEPAEANGI ITGYEVIYMP INEDKKPTGP1380
 1381 PKKVMIDNPK KRMLLIENLQ PSQTYCYKVR ASNKVGWGPY REATINLASQ PTRPMSIPII1440
 1441 PDIPIVDAEA GEEYDSYLMY SNEVLRSPTS SLRPSVTDLS DDQFVNGKWE QNFLFPGGGG1500
 1501 GSLSRNISSS STTYSHSTPR TNVTNNSSTT TYISGKGGST THRYDVRDGG LLKEDVILRK1560
 1561 RSENRHYTEG DGVRDSIVMG NLSGGLLDNL ESRFTPGVPA TPSRLVFSAL GHTALKVSWQ1620
 1621 EPHCESDVLG YCVLYQLING GDVKRIEVNN PAQNSVLVQD LLPNQSYIFK VKAQSREGWG1680
 1681 PEREGVITIE SNVDPKSPLS PVPGSPFTLS TPSAPGPLIF TALRPDTLQL SWEKPRKPNG1740
 1741 DILGYVVTCE QLHGGXDLRS FQVNGNAATS LTVSDLKENM PYKFKVQAQT TQGFGPEREG1800
 1801 IITIESQDGG SMSQYSSQSV TKREVFNLPT EITHTSHTMF SEPFVSSDGM MMMSSRQITE1860
 1861 SGGSMTRQVE MVQRGVMSSS TVTKRLERQY YEA

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