YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68444491, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGSDIQLCF IFYSTLLILK MYIIAIITGQ VRLRKKAFAN PEDAERHGGV QFCRTDPYVE  60
   61 RCRRAQQNDM ENILPFLFLG AVYSMTSPSY AAAQLHFLIF FLGRVLHSVA YLLALKAPTR 120
  121 SLAYVIAQVP CISMAIQILM EVASFA

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.71
Transmembrane Helix	8	29	0.87
Cytoplasmic	30	72	0.77
Transmembrane Helix	73	92	0.70
Non-Cytoplasmic	93	94	0.50
Transmembrane Helix	95	115	0.78
Cytoplasmic	116	121	0.75
Transmembrane Helix	122	143	0.81
Non-Cytoplasmic	144	146	0.66