YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62202055
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIVSYEISP LFAQLSWRAQ SDIAGRKMSC WLREQTLLLA EDYISFCSGI QQTPPSESAE  60
   61 AMRYLAKEME QQHRTKFRSL SQEFLDTCGA DPSKCLQSVM RELVGDGKMN WGRVVSIFTF 120
  121 TGVLASELLS RGENSEGSRR LAETIADYLG GEKQDWLVEN GGWEGFCRFF HNARQLNQES 180
  181 SMKTALFAAA GVGLAGLTFL LVR

Type	Start	End	Confidence
Non-Cytoplasmic	1	183	0.57
Transmembrane Helix	184	202	0.92
Cytoplasmic	203	203	0.65