YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62955693, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIRTRFLFI ALSFVCCYAE GVRSKSKVCA NVLCGAGREC SVTEKGEPTC LCIEQCKPHN  60
   61 HPVCGSNGKM YQNHCELHRD ACLTGVKIQI SHDGQCEEKK MEKIINSPIV CYLADRNELR 120
  121 SRVIEWLQSE VEPDGWFSKG SNFSDVLLKY FQSYDNGDAQ LDSAELLKFI QHNETAVNIT 180
  181 SPYAEDENNR LLRSLCVDAL IELSDENADW KLSFDEFLNC LRPGFNPPER KCALEDETYE 240
  241 DGAETQMECN RCICACGNWV CTAVICDGSN KLQALEEMEG NNQEMTEEEW VQRVAELNKH 300
  301 QETVEKMKMG DKEV

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	314	0.99