YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60678578
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAMRQFYME VPIVTRAYTT VCVLTTLAVH LDLVSPLQLY FNPTLIVRKF QIWRLATTFL  60
   61 YFGTIGISFF FNMIFTYRYC RMLEDGSFRG RSSDFVMMFI FGGVLMTFFG IFVNLLFLGQ 120
  121 AFTLMLVYVW SRRNPLVPMN FFGVLNFQAP YLPWVLLCCS MILGNTIWVD IIGMGVGHIY 180
  181 YVLEDVYPQL TNGFRLIKTP YFLKRLFNEH IERNYQTAAE DRPGGFMWGD EQPLEPEAAA 240
  241 VANEAPDAAE QPAGAAIQ

Type	Start	End	Confidence
Cytoplasmic	1	13	0.92
Transmembrane Helix	14	34	0.90
Non-Cytoplasmic	35	54	0.88
Transmembrane Helix	55	76	0.90
Cytoplasmic	77	94	0.91
Transmembrane Helix	95	118	0.92
Non-Cytoplasmic	119	149	0.84
Transmembrane Helix	150	169	0.93
Cytoplasmic	170	258	0.94