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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34597313
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQFMSVVRF KFGFTSVRMR DWSVGVSIMV LTLIFIIRYE QSDHTHTVDD SSIEGESVHE  60
   61 PAKKPHFMTL EDLDYLFSNK SFFGEEEVSN GMLVWSRMRP FLERPDALPE TAQGIEEATL 120
  121 AMKGLVLEIS REKRAYSSGM VSKEIRRICP DFVTAFDKDL SGLSHVLLEL PCGLIEDSSI 180
  181 TLVGIPDEHS SSFQIQLVGS GLSGETCRPI ILRYNVNFSK PSIVQNTWTE KLGWGNEERC 240
  241 QYHGSLKNHL VDELPLCNKQ TGRIISEKSS NDDATMELSL SNANSPFLKG SPFTAALWFG 300
  301 LEGFHMTING RHETSFAYRE KLEPWLVSAV KVSGGLKILS VLATRLPIPD DHASLIIEEK 360
  361 LKAPSLSGTR IELLVGVFST GNNFKRRMAL RRSWMQYEAV RSGKVAVRFL IGLHTNXKVN 420
  421 LEMWRESTAY GDXQXMXXCD YYGLLSLKTX ALCILGTKVX PAKYXXMSGC DAFVRXDELL 480
  481 SSLEXRPSSX LLYGLISFDS SPDREQGSKW FIPKEEWPLD SYPPWAHGPG YIISHDIAKF 540
  541 VVKGHRQRDL GLFKLEDVAM GIWIQQFNQT IKRVKYINDK RFHNSDCKSK YILVHYQTPR 600
  601 LILCLWEKLQ KENQSICCE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle