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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|63080992
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.18
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRIVRAESEL SPSEKAYLNA VEKGDYASVK KSLEEAEIYF KININCIDPL GRTALLIAIE  60
   61 NENLELIELL LSFNVYVGDA LLHAIRKEVV GAVELVVNHK KPSGEKQVPP ILLDKQFSEF 120
  121 TPDITPIILA AHTNNYEIIK LLVQKGVSVP RPHEVRCNCV ECVSSSDVDS LRHSRSRLNT 180
  181 YKALASPSLI ALSSEDPFLT ASQLSWELQE LSKVENEFKS EYEELSRQCK QFAKDLLDQT 240
  241 RSSRELEIIL NYRDDNSLLE EQSGNDLARL KLAIKYRQKE FVAQPNCQQL LASRWYDEFP 300
  301 GWRSRHWAVK MVTCFIIGLL FPVFSMCYLI APKSPLGLFI RKPFIKFICH TASYLTFLFL 360
  361 LLLASQHIDR SDLNRQGPPP TIVEWMILPW VLGFIWGEIK QMWDGGLQDY IHDWWNLMDF 420
  421 VMNSLYLATI SLKIVAFVKY SALHPRESWD MWHPTLVAEA LFAIANIFSS LRLISLFTAN 480
  481 SHLGPLQISL GRMLLDILKF LFIYCLVLLA FANGLNQLYF YYEETKGLSC KGIRCEKQNN 540
  541 AFSTLFETLQ SLFWSIFGLI NLYVTNVKAQ HGFTEFVGAT MFGTYNVISP VVLLNMLIAM 600
  601 MNNSYQLIAD HADIEWKFAR TKLWMSYFEE GGTLPTPFNV IPSPKSLWYL IKWIWTHLCK 660
  661 KKMRRKPESF GTIGRRAADN LRRHHQYQEV MRNLVKRYVA AMIRDAKTEE GLTEENFKEL 720
  721 KQDISSFRFE VLGLLRGSKL STAQGASATK ESSNPADSDE KSDNEGNSKD KKKHFSLFDL 780
  781 TTLIHPRSAA IASERHNMSN GSALVVQELP REKQRKVNFV ADIKNFGLFH RRSKQNAAEQ 840
  841 NANPIFSVSE EVARQQAAGP LGRNIQLESR GLATRGDLSI PGLSEQCVLV DHKERNTDTL 900
  901 GLQVGKRVCS FKSEKVVVED TVPIIPKERH DKDEDSSTDY DLTPTDTGAH EDYVTTRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle