YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57790314, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGTMRVMET RLLLLLWALF VFEVACTHRS APRVHLAFKE LMDTRTARPF SFSFNTSDYR  60
   61 ILHVDPDQGR LYLGSREYLV SLDMQNINKE PLIIHWPAPA QRKGECQLTG KGRHGECANF 120
  121 VRLIEPWNRT HLYTCGTGAY KPICTFINRG WRAEDYLFRL VPGYVDSGKG KCSYDPNQEN 180
  181 VASLINGNLY AGVAVDFMST DPGIFRTMGS RPAVRSEQYD SKWLNEPVFV QMKQISDSSE 240
  241 KNDDKLYFFF REKSLDSGGG ASPSVLAKVG RVCLNDEGGQ KSLVNKWTTF LKARLVCSVM 300
  301 GDDGVETFFD ELRDVFIQPS QDERNPIVYG VFSTSGSVFK GSAVCVYSMA DIRNVFNGPF 360
  361 AHKHGHNYQW TTYTGKIPYP RPGTCPGGTF TPGLQSTKEF SDEAVNFIRA HPLMYHPVYP 420
  421 IHKRPLVVRS GVDYRFTTIA VDQVDAVDGR YEVLFLGTDR GTVQKVIVLP KDPTTMEELT 480
  481 LEEVEVFRTP APVKTMHISA KRQQLYASSE VGLTQMSLHR CGVYGKACSD CCLARDPYCA 540
  541 WDGDNCSAFT QATKRRSRRQ DVKHGDPLRQ CRGYNAKVER RLKEKVQFGV EGSSTFLECV 600
  601 PRSPQATIKW LYQKEGRRKV LNRDGEVLRT PQGVLLKALT KAEAGQYHCL ATENNFKHTL 660
  661 ARVSLRILDR DIAVALTTPD EDEEEALRSS HKGHQHQPAP PTPALLLEPE MRLIQQYCQS 720
  721 YWEQLTAGGN PRAELPKRTN RRHTEESEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle