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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57790310, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGAGTLVLG TLLVSVFSAV SVHSSPLSSL PPASVPRVFL SFKELKSTGT AHHFALLLNS  60
   61 TDYRILRMDE DHDRMYVGSK DYILSLDLND INKEPLIIHW PVAPQKRTEC VLSGKDINGE 120
  121 CGNFIRLIEP WNRTHLYVCG TGAYNPICTY VDRGQRAQGF LQDQMPRAGG RTSRAADPSA 180
  181 SPEPYAPKEY IFRLEPGKVD SGKGKCPYDP KLNSVSALIN GQLYAGVYID FMGTDSAIFR 240
  241 TLGKHTAMRT DQYNSRWLHD PTFVHAQLIP DSAEKNDDKL YFFFREKASE MGQTPMAQSR 300
  301 IGRICLNDDG GHCCLVNKWS TFLKARLIYS VTGSDGIETH FDELRDVYIQ KTQDTKNPVI 360
  361 YGVFSVSGSV FKGSAVCVYS MADVRMVFNG PFAHKEGPNY QWVAYQGKIP YPRPGTCPGG 420
  421 TFTPNMKSTK DYPDEVINFM RTHPTMFNAV YPVHKRPLVV RTNVDYEFTT ITVDQVAAAD 480
  481 GNYEVLFLGT DRGTVQKVIV LPRDDLQTEE LVLEEVEVFR VPTSITTMKI SPKRQQLYVS 540
  541 SGVGVTHLAL HRCDVYGEAC ADCCLARDPY CAWDGKSCSR YSANQKRRSR RQDVKYGNPI 600
  601 RQCRGYNSNA NKNTLETVQY GVEGSTAFLE CQARSPHVSI KCHFQKENSD RRREIRSDGR 660
  661 VVRTEQGLLL RSLQLSDSGV YQCTSTEKNF KHTLVKLQLV VLSAHTVSSI QTESGAPAAP 720
  721 PLQSSAWAPS AEQYKDLLTI LSQPEMGLIN QYCQDYWQIG DDPMAHRKKD LKELQKDLRK 780
  781 PRNRRHHQEQ SSMAET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle